Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding periplasmic protein | LPB072_RS00210 | Not Available | Negative | 39714 - 40646 | 32284.3 |
| c-type cytochrome | LPB072_RS00215 | Not Available | Negative | 40648 - 40923 | 10110.9 |
| pqq-dependent dehydrogenase, methanol/ethanol family | LPB072_RS00220 | Not Available | Negative | 41003 - 42673 | 60428.6 |
| helix-turn-helix domain-containing protein | LPB072_RS00225 | Not Available | Positive | 42911 - 44176 | 44959.4 |
| 3-deoxy-7-phosphoheptulonate synthase | LPB072_RS00230 | Not Available | Positive | 44211 - 45314 | 39230.9 |
| patatin-like phospholipase family protein | LPB072_RS00235 | Not Available | Positive | 45336 - 46364 | 37864.6 |
| paai family thioesterase | LPB072_RS00240 | Not Available | Negative | 46358 - 46819 | 16143.6 |
| merr family transcriptional regulator | LPB072_RS00245 | Not Available | Negative | 46837 - 47289 | 17234.0 |
| translation initiation factor if-1 | LPB072_RS00250 | Not Available | Negative | 47540 - 47794 | 9613.9 |
| hypothetical protein | LPB072_RS00255 | Not Available | Negative | 47822 - 48148 | 11656.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
