Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygalactonokinase | LPB072_RS00060 | Not Available | - | 14039 - 15070 | 36112.2 |
| homocysteine s-methyltransferase | LPB072_RS00065 | Not Available | - | 15193 - 16173 | 35412.0 |
| trans-sulfuration enzyme family protein | LPB072_RS00070 | Not Available | - | 16201 - 17436 | 43591.5 |
| abc transporter permease | LPB072_RS00075 | Not Available | - | 17527 - 18222 | 25313.3 |
| abc transporter permease | LPB072_RS00080 | Not Available | - | 18219 - 18899 | 24677.6 |
| transporter substrate-binding domain-containing protein | LPB072_RS00085 | Not Available | - | 18929 - 19711 | 28045.2 |
| abc transporter atp-binding protein | LPB072_RS00090 | Not Available | - | 19771 - 20568 | 29117.3 |
| lrp/asnc family transcriptional regulator | LPB072_RS00095 | Not Available | + | 20765 - 21229 | 17585.4 |
| 2-keto-4-pentenoate hydratase | LPB072_RS00100 | Not Available | - | 21285 - 22169 | 31052.8 |
| lysr family transcriptional regulator | LPB072_RS00105 | Not Available | + | 22333 - 23340 | 36674.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
