Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Salipiger
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Salipiger |
| Species | Salipiger profundus |
| Strain | strain JLT2016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Salipiger profundus strain JLT2016
Gene Summary
Adenine Count
4838 bp
Thymine Count
4598 bp
Guanine Count
7808 bp
Cytosine Count
7875 bp
Genome Length
25119 bp
Protein-coding Genes
25 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | Ga0080559_RS24000 | Not Available | + | 16668 - 17531 | 31916.5 |
| duf2160 domain-containing protein | Ga0080559_RS24005 | Not Available | + | 17750 - 18025 | 10149.6 |
| abc transporter substrate-binding protein | Ga0080559_RS24010 | Not Available | + | 18088 - 19803 | 63858.1 |
| glycerol kinase glpk | Ga0080559_RS24015 | Not Available | + | 19902 - 21398 | 54088.1 |
| recombinase family protein | Ga0080559_RS24020 | Not Available | - | 21545 - 22132 | 21517.0 |
| hypothetical protein | Ga0080559_RS24030 | Not Available | + | 1453 - 1659 | 7770.18 |
| helix-turn-helix domain-containing protein | Ga0080559_RS24035 | Not Available | + | 2227 - 2808 | 21020.2 |
| relaxase/mobilization nuclease domain-containing protein | Ga0080559_RS24040 | Not Available | + | 2795 - 5122 | 87783.4 |
| type iv secretory system conjugative dna transfer family protein | Ga0080559_RS24045 | Not Available | + | 5131 - 7146 | 73720.9 |
| hypothetical protein | Ga0080559_RS24050 | Not Available | - | 7217 - 7780 | 20446.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.