Salipiger profundus strain JLT2016

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Salipiger

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSalipiger
SpeciesSalipiger profundus
Strainstrain JLT2016

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salipiger profundus strain JLT2016

NZ_CP014800.1NZ_CP014801.1NZ_CP014796.1NZ_CP014803.1NZ_CP014804.1NZ_CP014799.1NZ_CP014797.1NZ_CP014802.1NZ_CP014798.1

Gene Summary

Adenine Count

19364 bp

Thymine Count

19786 bp

Guanine Count

32361 bp

Cytosine Count

31326 bp

Genome Length

102837 bp

Protein-coding Genes

107 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinGa0080559_RS23910Not Available+245 - 58012105.3
hypothetical proteinGa0080559_RS27340Not Available-654 - 8487423.16
transposaseGa0080559_RS23915Not Available+1096 - 234645920.1
mobq family relaxaseGa0080559_RS23920Not Available+2936 - 442655702.8
dna-binding proteinGa0080559_RS23925Not Available-4696 - 501311737.7
type ii toxin-antitoxin system vapc family toxinGa0080559_RS23930Not Available-5016 - 540513671.6
abrb/maze/spovt family dna-binding domain-containing proteinGa0080559_RS23935Not Available-5414 - 56779893.84
hypothetical proteinGa0080559_RS26455Not Available-5862 - 60206129.31
replication initiator protein aGa0080559_RS23940Not Available+6264 - 729539426.1
helix-turn-helix domain-containing proteinGa0080559_RS23945Not Available+7490 - 77419262.9

Displaying genes 1 – 10 of 5229 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002147N-ethylsuccinimideC6H9NO2Chemical structure of N-ethylsuccinimide2314-78-5
Average127.1412Da
Monoisotopic127.0633285Da
BASm00026033-hydroxy-2-methylpropanoyl-CoAC25H38N7O18P3SChemical structure of 3-hydroxy-2-methylpropanoyl-CoANot available
Average849.59Da
Monoisotopic849.1228839Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003462(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12PChemical structure of (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate3031-95-6
Average454.2833Da
Monoisotopic454.0737086Da
BASm00050742-(4-dimethylaminophenyl)diazenylbenzoateC15H14N3O2Chemical structure of 2-(4-dimethylaminophenyl)diazenylbenzoateNot available
Average268.297Da
Monoisotopic268.109150283Da
BASm0009729(E)-2-((N-methylformamido) methylene)succinateC7H7NO5Chemical structure of (E)-2-((N-methylformamido) methylene)succinateNot available
Average185.136Da
Monoisotopic185.033519489Da

Displaying 1–8 of 8 metabolites