Serratia liquefaciens strain FDAARGOS_125

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia liquefaciens strain FDAARGOS_125 is a Gram-negative bacterium that thrives in aerobic environments, primarily found in soil habitats. This strain exhibits the characteristic features of the Serratia genus, which is known for its metabolic versatility and ability to adapt to various ecological niches. The aerobic nature of Serratia liquefaciens suggests its reliance on oxygen for growth and energy production, enabling it to participate in soil biogeochemical processes. The presence of this strain in soil ecosystems could indicate its potential role in nutrient cycling, particularly in the decomposition of organic matter. As a member of the microbial community in soil, Serratia liquefaciens may contribute to the breakdown of complex organic compounds, thus facilitating the availability of nutrients for plants and other organisms within the ecosystem. The adaptability of Serratia liquefaciens strain FDAARGOS_125 to aerobic conditions highlights its potential significance in maintaining soil health and fertility. Further research into its specific metabolic pathways and interactions within soil microbiomes could provide deeper insights into its ecological role and contributions to soil dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia liquefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia liquefaciens strain FDAARGOS_125


Gene Summary

Adenine Count

1178474 bp

Thymine Count

1182158 bp

Guanine Count

1463032 bp

Cytosine Count

1461076 bp

Genome Length

5284740 bp

Protein-coding Genes

4780 genes

Non-Coding Genes

200 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+3863203 - 3863216Not Available
Putative integraseAL485_RS18425Not Available+3867648 - 386887747018.3
Hypothetical proteinAL485_RS18430Not Available-3868855 - 386913010546.6
hypothetical proteinAL485_RS18435Not Available-3869320 - 386972115246.4
Hypothetical proteinAL485_RS18440Not Available-3869718 - 38699278180.88
Hypothetical proteinAL485_RS18445Not Available-3870157 - 387048012604.0
Hypothetical proteinAL485_RS18450Not Available-3870780 - 387128317527.4
Hypothetical proteinAL485_RS18455Not Available-3871287 - 38714907606.81
Hypothetical proteinAL485_RS25590Not Available-3871490 - 387217625408.0
Hypothetical proteinAL485_RS18465Not Available-3872181 - 387248011364.7

Displaying genes 1 – 10 of 4980 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

322 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da

Displaying 1–10 of 322 metabolites