Serratia fonticola str. DSM 4576

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia fonticola strain DSM 4576 is a Gram-negative, nonsporulating rod-shaped bacterium that exhibits facultative anaerobic metabolism, utilizing a chemoheterotrophic lifestyle for energy acquisition. This organism is versatile in its habitat, thriving in multiple environments, which suggests a broad ecological adaptability. As a facultative anaerobe, S. fonticola has the ability to grow in both the presence and absence of oxygen, allowing it to exploit various niches where organic substrates are available. The rod shape of this bacterium, combined with its nonsporulating nature, implies a reliance on vegetative growth rather than survival strategies typically associated with spore formation. This characteristic may reflect its ecological adaptations to environments where nutrient availability fluctuates but does not necessitate extreme survival mechanisms. The chemoheterotrophic energy source indicates that S. fonticola can metabolize organic compounds, which could include a range of carbon sources, potentially influencing its interactions with other microorganisms and its role in nutrient cycling. In summary, the ability of Serratia fonticola str. DSM 4576 to thrive in diverse habitats while utilizing organic substrates for energy underscores its ecological versatility, which may contribute to its presence in various microbial communities where organic matter is abundant.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia fonticola
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia fonticola str. DSM 4576
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Serratia fonticola str. DSM 4576

Accession NumberNZ_CP011254.1

Gene Summary

Adenine Count

1392192 bp

Thymine Count

1391277 bp

Guanine Count

1604535 bp

Cytosine Count

1612507 bp

Genome Length

6000511 bp

Protein-coding Genes

5300 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail fiber proteinWN53_RS28535Not Available-293011 - 29518576815.9
Tail fiberWN53_RS26700Q6XQB2-295424 - 29755075320.1
hypothetical proteinWN53_RS01230Not Available-297599 - 2977847035.54
hypothetical proteinWN53_RS01235Not Available-297765 - 29813614285.6
Central tail fiberWN53_RS26705P03749-298133 - 303619195809.0
Tail assembly proteinWN53_RS01245O64334-303677 - 30433022537.3
Tail fiber cell wall hydrolaseWN53_RS01250O64333-304327 - 30503727374.4
Minor tail protein lWN53_RS01255O64332-305040 - 30579227290.1
Putative minor tail proteinWN53_RS01260Not Available-305801 - 30614212520.8
Tail length tape measure proteinWN53_RS28540O64330-306426 - 30785350548.9

Displaying genes 1 – 10 of 5420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

341 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 341 metabolites