Campylobacter coli strain OR12

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter coli strain OR12 is a Gram-negative, microaerophilic bacterium that exhibits distinct physiological characteristics suitable for its ecological niche. This strain of Campylobacter coli is known for its adaptation to environments with reduced oxygen levels, which is a defining trait of microaerophilic organisms. Such conditions are typically found in the gastrointestinal tracts of various animals, where this bacterium may thrive and play a role in the complex microbial communities present. Gram-negative bacteria like C. coli possess a unique cell wall structure characterized by a thin peptidoglycan layer and an outer membrane, which contributes to their resilience in competitive environments. The microaerophilic nature of strain OR12 suggests that it requires specific atmospheric conditions for optimal growth, typically involving lower concentrations of oxygen than those found in the atmosphere. This may influence its metabolic pathways and interactions with other microorganisms within its habitat. Understanding the traits of Campylobacter coli strain OR12 can provide insights into its potential roles in the microbiomes of host organisms and its interactions with the environment. The microaerophilic adaptation of this strain likely reflects the ecological pressures present in its native habitat, allowing it to occupy a niche that is not favorable for strictly aerobic or anaerobic organisms. This specialization may have implications for its survival and ecological interactions, highlighting the intricate balance of microbial life within host ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter coli
Strainstrain OR12

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter coli strain OR12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter coli strain OR12


Gene Summary

Adenine Count

11085 bp

Thymine Count

9310 bp

Guanine Count

4046 bp

Cytosine Count

3540 bp

Genome Length

27981 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
virb8 family proteinATE51_RS11225Not Available+15443 - 1610525016.1
p-type conjugative transfer protein virb9ATE51_RS11230Not Available+16102 - 1698934085.6
type iv secretion system protein virb10ATE51_RS11235Not Available+17016 - 1819143078.8
p-type dna transfer atpase virb11ATE51_RS11240Not Available+18172 - 1916437588.2
type iv secretory system conjugative dna transfer family proteinATE51_RS11245Not Available+19165 - 2097668713.0
cag pathogenicity island cag12 family proteinATE51_RS11250Not Available+20957 - 2139416801.5
trbm/kika/mpfk family conjugal transfer proteinATE51_RS11255Not Available+21406 - 2216829257.5
hypothetical proteinATE51_RS11260Not Available+22171 - 2296830694.5
hypothetical proteinATE51_RS11265Not Available+23039 - 2365923838.0
dna topoisomerase 3ATE51_RS11270Not Available+23922 - 2611483948.6

Displaying genes 21 – 30 of 2304 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites