Campylobacter coli strain OR12

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter coli strain OR12 is a Gram-negative, microaerophilic bacterium that exhibits distinct physiological characteristics suitable for its ecological niche. This strain of Campylobacter coli is known for its adaptation to environments with reduced oxygen levels, which is a defining trait of microaerophilic organisms. Such conditions are typically found in the gastrointestinal tracts of various animals, where this bacterium may thrive and play a role in the complex microbial communities present. Gram-negative bacteria like C. coli possess a unique cell wall structure characterized by a thin peptidoglycan layer and an outer membrane, which contributes to their resilience in competitive environments. The microaerophilic nature of strain OR12 suggests that it requires specific atmospheric conditions for optimal growth, typically involving lower concentrations of oxygen than those found in the atmosphere. This may influence its metabolic pathways and interactions with other microorganisms within its habitat. Understanding the traits of Campylobacter coli strain OR12 can provide insights into its potential roles in the microbiomes of host organisms and its interactions with the environment. The microaerophilic adaptation of this strain likely reflects the ecological pressures present in its native habitat, allowing it to occupy a niche that is not favorable for strictly aerobic or anaerobic organisms. This specialization may have implications for its survival and ecological interactions, highlighting the intricate balance of microbial life within host ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter coli strain OR12


Gene Summary

Adenine Count

11085 bp

Thymine Count

9310 bp

Guanine Count

4046 bp

Cytosine Count

3540 bp

Genome Length

27981 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf5710 domain-containing proteinATE51_RS11125Not Available+1 - 123347114.4
eexn family lipoproteinATE51_RS11130Not Available+1348 - 16119660.36
hypothetical proteinATE51_RS11135Not Available-1771 - 19808487.9
protein kinase family proteinATE51_RS11140Not Available-2130 - 330246183.4
type ii toxin-antitoxin system hicb family antitoxinATE51_RS11145Not Available+4030 - 42488186.88
aaa family atpaseATE51_RS11150Not Available+4339 - 613269147.5
hypothetical proteinATE51_RS11155Not Available-6136 - 651315198.3
hypothetical proteinATE51_RS11160Not Available-6566 - 682010054.8
recombinase family proteinATE51_RS11165Not Available-6922 - 753623556.8
virulence-associated protein vapdATE51_RS11170Not Available-7533 - 791015005.1

Displaying genes 1 – 10 of 2304 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites