Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS00205 | Not Available | - | 56737 - 58305 | 58164.0 |
| tonb-dependent receptor | BvMPK_RS00210 | Not Available | - | 58342 - 61437 | 115414.0 |
| two-component regulator propeller domain-containing protein | BvMPK_RS00215 | Not Available | - | 61578 - 65738 | 157844.0 |
| arac family transcriptional regulator | BvMPK_RS00220 | Not Available | + | 65887 - 66807 | 35142.8 |
| lytic transglycosylase domain-containing protein | BvMPK_RS00225 | Not Available | + | 66815 - 67813 | 37425.9 |
| ion transporter | BvMPK_RS00230 | Not Available | - | 67839 - 68696 | 32735.9 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | BvMPK_RS00235 | Not Available | + | 68812 - 71907 | 117601.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS00240 | Not Available | + | 72303 - 74869 | 90570.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS00245 | Not Available | + | 74924 - 75450 | 20760.8 |
| fecr family protein | BvMPK_RS00250 | Not Available | + | 75447 - 76457 | 38656.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

