Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosidase | BvMPK_RS00105 | Not Available | - | 30819 - 31997 | 44114.3 |
| aryl-sulfate sulfotransferase | BvMPK_RS00110 | Not Available | - | 32111 - 33910 | 68271.1 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS00115 | Not Available | - | 34112 - 35878 | 67693.4 |
| tonb-dependent receptor | BvMPK_RS00120 | Not Available | - | 35905 - 38934 | 110618.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS00125 | Not Available | - | 39765 - 41278 | 55285.5 |
| hypothetical protein | BvMPK_RS00130 | Not Available | + | 41388 - 41618 | 9117.75 |
| helix-turn-helix transcriptional regulator | BvMPK_RS00135 | Not Available | - | 41611 - 42500 | 34257.9 |
| pyrroline-5-carboxylate reductase | BvMPK_RS00140 | Not Available | - | 42683 - 43456 | 27247.4 |
| aspartate aminotransferase family protein | BvMPK_RS00145 | Not Available | - | 43640 - 44764 | 40936.8 |
| n-acetyl-gamma-glutamyl-phosphate reductase | BvMPK_RS00150 | Not Available | - | 44778 - 45746 | 36034.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

