Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS00005 | Not Available | - | 24 - 1203 | 43559.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS00010 | Not Available | - | 1216 - 4492 | 117222.0 |
| vape domain-containing protein | BvMPK_RS00015 | Not Available | - | 4829 - 5944 | 43781.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21390 | Not Available | - | 6083 - 6288 | 7799.48 |
| helix-turn-helix transcriptional regulator | BvMPK_RS00020 | Not Available | + | 6290 - 6925 | 23614.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS00025 | Not Available | + | 7003 - 8708 | 61254.4 |
| hypothetical protein | BvMPK_RS00030 | Not Available | + | 8720 - 9142 | 16326.9 |
| susc/raga family tonb-linked outer membrane protein | BvMPK_RS00035 | Not Available | + | 9330 - 12740 | 124880.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS00040 | Not Available | + | 12768 - 14654 | 71981.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS00050 | Not Available | + | 15117 - 18271 | 113355.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

