Weissella cibaria strain CH2

Gram-negativeFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella cibaria strain CH2 is a Gram-negative, facultative anaerobic bacterium primarily associated with diverse habitats, including traditional Korean kimchi, tropical fruits, pasture environments, and even human saliva. This strain exemplifies the versatility of Weissella species in thriving in both fermented food matrices and natural ecosystems. The isolation of Weissella cibaria from various substrates highlights its potential role in fermentation processes, particularly in the production of kimchi, where it may contribute to flavor development and microbial diversity. Its presence in tropical fruits suggests a possible involvement in the fermentation of these foods, which could enhance their preservation and nutritional value. Furthermore, the detection of Weissella cibaria in pastoral and soil habitats indicates its ecological adaptability and potential interactions within microbial communities. The facultative anaerobic nature of this strain allows it to survive in both oxygen-rich and oxygen-poor environments, which may facilitate its colonization and persistence in varied ecological niches. This adaptability may also suggest that Weissella cibaria strain CH2 could play a role in the fermentation processes beyond those traditionally associated with its use in food production, potentially influencing the microbial dynamics of its diverse habitats. Understanding the ecological roles of such strains can provide insights into their contributions to food microbiology and environmental microbiomes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella cibaria
Strainstrain CH2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatChili Bo; Korean kimchi; pasture; saliva; soil; tropical fruits
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Gene Summary

Adenine Count

843 bp

Thymine Count

802 bp

Guanine Count

676 bp

Cytosine Count

540 bp

Genome Length

2861 bp

Protein-coding Genes

2 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
transposaseAO080_RS11745Not Available-5344 - 55477638.63
hypothetical proteinAO080_RS12765Not Available-5597 - 57675893.34
crp/fnr family transcriptional regulatorAO080_RS11750Not Available-5808 - 631318712.6
hypothetical proteinAO080_RS11755Not Available-6329 - 65237357.48
alkaline shock response membrane anchor protein amapAO080_RS11760Not Available-6543 - 709720857.0
glsb/yeaq/ymge family stress response membrane proteinAO080_RS11765Not Available-7125 - 73708113.35
hypothetical proteinAO080_RS11770Not Available-8637 - 899614014.8
hypothetical proteinAO080_RS11775Not Available-9038 - 932811686.8
hypothetical proteinAO080_RS11780Not Available-9325 - 95046494.37
heavy metal translocating p-type atpaseAO080_RS11785Not Available+9800 - 1165066574.1

Displaying genes 11 – 20 of 2556 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites