Weissella cibaria strain CH2

Gram-negativeFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella cibaria strain CH2 is a Gram-negative, facultative anaerobic bacterium primarily associated with diverse habitats, including traditional Korean kimchi, tropical fruits, pasture environments, and even human saliva. This strain exemplifies the versatility of Weissella species in thriving in both fermented food matrices and natural ecosystems. The isolation of Weissella cibaria from various substrates highlights its potential role in fermentation processes, particularly in the production of kimchi, where it may contribute to flavor development and microbial diversity. Its presence in tropical fruits suggests a possible involvement in the fermentation of these foods, which could enhance their preservation and nutritional value. Furthermore, the detection of Weissella cibaria in pastoral and soil habitats indicates its ecological adaptability and potential interactions within microbial communities. The facultative anaerobic nature of this strain allows it to survive in both oxygen-rich and oxygen-poor environments, which may facilitate its colonization and persistence in varied ecological niches. This adaptability may also suggest that Weissella cibaria strain CH2 could play a role in the fermentation processes beyond those traditionally associated with its use in food production, potentially influencing the microbial dynamics of its diverse habitats. Understanding the ecological roles of such strains can provide insights into their contributions to food microbiology and environmental microbiomes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella cibaria
Strainstrain CH2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatChili Bo; Korean kimchi; pasture; saliva; soil; tropical fruits
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Gene Summary

Adenine Count

7856 bp

Thymine Count

7342 bp

Guanine Count

4324 bp

Cytosine Count

4552 bp

Genome Length

24074 bp

Protein-coding Genes

25 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
replication initiation factor domain-containing proteinAO080_RS12265Not Available+452 - 130033016.0
hypothetical proteinAO080_RS12270Not Available+1941 - 247720622.4
is30-like element islpl1 family transposaseAO080_RS12235Not Available-363 - 129235908.9
abc transporter permeaseAO080_RS12240Not Available+1505 - 233830567.1
abc transporter permeaseAO080_RS12245Not Available+2331 - 311929111.0
abc transporter atp-binding proteinAO080_RS12250Not Available+3130 - 417339267.2
abc transporter substrate-binding proteinAO080_RS12255Not Available+4219 - 522336547.7
crp/fnr family transcriptional regulatorAO080_RS12375Not Available-27 - 67723986.3
crp/fnr family transcriptional regulatorAO080_RS11735Not Available+2156 - 330741229.8
crp/fnr family transcriptional regulatorAO080_RS11740Not Available+4107 - 489628053.1

Displaying genes 1 – 10 of 2556 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites