Sphingopyxis macrogoltabida strain EY-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis macrogoltabida
Strainstrain EY-1

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis macrogoltabida strain EY-1

NZ_CP012703.1NZ_CP012702.1NZ_CP012705.1NZ_CP012700.1NZ_CP012701.1NZ_CP012704.1

Gene Summary

Adenine Count

6284 bp

Thymine Count

6457 bp

Guanine Count

10628 bp

Cytosine Count

11105 bp

Genome Length

34474 bp

Protein-coding Genes

41 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf4160 domain-containing proteinAN936_RS23535Not Available+5569 - 57968410.18
duf2442 domain-containing proteinAN936_RS23540Not Available+5793 - 624516107.1
histidine phosphatase family proteinAN936_RS23545Not Available+6252 - 687222811.0
tyrosine-type recombinase/integraseAN936_RS23550Not Available-6869 - 783735379.6
hypothetical proteinAN936_RS23555Not Available-7834 - 822915088.7
helix-turn-helix domain-containing proteinAN936_RS23560P0ACN2-8354 - 873414574.7
sdr family oxidoreductaseAN936_RS23565B1VN94+8881 - 976830814.6
tetr/acrr family transcriptional regulator c-terminal domain-containing proteinAN936_RS23570Not Available-10006 - 102247860.63
mfs transporterAN936_RS23575P70786-10175 - 1089426043.0
is256-like element isspma2 family transposaseAN936_RS23580P60231-10993 - 1220745544.2

Displaying genes 11 – 20 of 4899 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002319Cu(+)CuChemical structure of Cu(+)7440-50-8
Average63.546Da
Monoisotopic62.92960108Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0009270[4-(6-methylheptanoyl)-5-oxo-2H-furan-3-yl]methyl phosphateC13H19O7PChemical structure of [4-(6-methylheptanoyl)-5-oxo-2H-furan-3-yl]methyl phosphateNot available
Average318.263Da
Monoisotopic318.0879371Da
BASm0009271[(3S,4R)-4-(6-methylheptanoyl)-5-oxooxolan-3-yl]methyl phosphateC13H21O7PChemical structure of [(3S,4R)-4-(6-methylheptanoyl)-5-oxooxolan-3-yl]methyl phosphateNot available
Average320.279Da
Monoisotopic320.1035872Da

Displaying 1–5 of 5 metabolites