Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1
Gene Summary
Adenine Count
5845 bp
Thymine Count
5769 bp
Guanine Count
9364 bp
Cytosine Count
9518 bp
Genome Length
30496 bp
Protein-coding Genes
28 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| replication initiator protein a | AN936_RS23485 | P60119 | + | 451 - 1563 | 42000.3 |
| ribbon-helix-helix domain-containing protein | AN936_RS23490 | Not Available | - | 1627 - 1941 | 10868.0 |
| para family partition atpase | AN936_RS23495 | Not Available | - | 1938 - 2591 | 22798.1 |
| sprt-like domain-containing protein | AN936_RS23500 | Not Available | - | 2718 - 3359 | 22584.1 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | AN936_RS23505 | A0A140ND86 | + | 3774 - 4055 | 10314.4 |
| type ii toxin-antitoxin system yafq family toxin | AN936_RS23510 | Not Available | + | 4024 - 4344 | 12212.5 |
| helix-turn-helix domain-containing protein | AN936_RS23515 | Not Available | + | 4380 - 4799 | 14875.6 |
| dna-binding transcriptional regulator | AN936_RS23520 | Not Available | + | 4869 - 5012 | 5276.64 |
| hypothetical protein | AN936_RS24535 | Not Available | + | 5026 - 5232 | 7667.98 |
| hypothetical protein | AN936_RS23530 | Not Available | - | 5204 - 5431 | 8138.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.