Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Pediococcus |
| Species | Pediococcus damnosus |
| Strain | strain TMW 2.1535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | beer; brewery; cider; wine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pediococcus damnosus strain TMW 2.1535
Gene Summary
Adenine Count
11496 bp
Thymine Count
11627 bp
Guanine Count
8480 bp
Cytosine Count
8094 bp
Genome Length
39697 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | ADU72_RS10515 | Not Available | - | 902 - 1525 | 24151.4 |
| hypothetical protein | ADU72_RS12315 | Not Available | - | 1500 - 1661 | 6678.16 |
| isl3 family transposase | ADU72_RS10520 | Not Available | + | 1864 - 3105 | 47705.7 |
| type ii toxin-antitoxin system pemk/mazf family toxin | ADU72_RS10530 | Not Available | - | 3674 - 4018 | 13042.6 |
| abrb/maze/spovt family dna-binding domain-containing protein | ADU72_RS10535 | Not Available | - | 4012 - 4275 | 10142.0 |
| site-specific integrase | ADU72_RS10540 | Not Available | + | 4361 - 4948 | 22515.3 |
| abc transporter permease | ADU72_RS10545 | Not Available | + | 5402 - 5701 | 11670.1 |
| numod4 motif-containing hnh endonuclease | ADU72_RS10550 | Not Available | + | 5764 - 6378 | 23446.0 |
| phage terminase small subunit p27 family | ADU72_RS10555 | Not Available | + | 6576 - 7034 | 17449.8 |
| hypothetical protein | ADU72_RS12320 | Not Available | - | 7048 - 7200 | 5777.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
