Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VO01_RS15355 | Not Available | + | 31 - 774 | 27808.1 |
| type ii toxin-antitoxin system hica family toxin | VO01_RS15360 | Not Available | + | 1254 - 1463 | 7867.59 |
| antitoxin hicb | VO01_RS15365 | Not Available | + | 1463 - 1858 | 14556.1 |
| para family protein | VO01_RS15370 | Not Available | + | 2060 - 2734 | 24500.0 |
| hypothetical protein | VO01_RS15375 | Not Available | + | 2734 - 3009 | 9933.7 |
| hypothetical protein | VO01_RS15380 | Not Available | + | 3089 - 5290 | 79876.0 |
| winged helix-turn-helix transcriptional regulator | VO01_RS15385 | Not Available | - | 5300 - 5602 | 11432.7 |
| hypothetical protein | VO01_RS15390 | Not Available | + | 6120 - 7094 | 33708.4 |
| hypothetical protein | VO01_RS15395 | Not Available | + | 7142 - 7528 | 13260.5 |
| hypothetical protein | VO01_RS16800 | Not Available | + | 7543 - 8253 | 23920.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
