Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VO01_RS15400 | Not Available | + | 8253 - 9650 | 47584.9 |
| hypothetical protein | VO01_RS15405 | Not Available | + | 9749 - 11329 | 57449.3 |
| atp/gtp-binding protein | VO01_RS15410 | Not Available | + | 11326 - 12897 | 57155.5 |
| hypothetical protein | VO01_RS15415 | Not Available | + | 12911 - 14014 | 37872.6 |
| hypothetical protein | VO01_RS15420 | Not Available | + | 14011 - 14466 | 15979.5 |
| hypothetical protein | VO01_RS15425 | Not Available | + | 14460 - 14984 | 18127.4 |
| hnh endonuclease family protein | VO01_RS15430 | Not Available | + | 14981 - 15757 | 27007.4 |
| hypothetical protein | VO01_RS15435 | Not Available | + | 15782 - 16342 | 20720.0 |
| is481-like element is1122 family transposase | VO01_RS15440 | Not Available | - | 16353 - 17315 | 36088.7 |
| recombinase family protein | VO01_RS15445 | Not Available | + | 17413 - 17796 | 13825.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
