Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya zeae EC1
Accession NumberNZ_CP006929.1
Gene Summary
Adenine Count
1057268 bp
Thymine Count
1053435 bp
Guanine Count
1207216 bp
Cytosine Count
1214445 bp
Genome Length
4532364 bp
Protein-coding Genes
3754 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase subunit tate | W909_RS05510 | Not Available | + | 1199941 - 1200150 | 7204.8 |
| lipoyl synthase | W909_RS05515 | Not Available | - | 1200255 - 1201220 | 36309.0 |
| lipoyl(octanoyl) transferase lipb | W909_RS05520 | Not Available | - | 1201411 - 1202121 | 26353.7 |
| duf493 family protein ybed | W909_RS05525 | Not Available | - | 1202232 - 1202495 | 9786.9 |
| d-alanyl-d-alanine carboxypeptidase daca | W909_RS05530 | Not Available | - | 1202630 - 1203841 | 44253.3 |
| endolytic peptidoglycan transglycosylase rlpa | W909_RS05535 | Not Available | - | 1204021 - 1205169 | 39827.9 |
| peptidoglycan glycosyltransferase mrdb | W909_RS05540 | Not Available | - | 1205179 - 1206291 | 40471.3 |
| peptidoglycan dd-transpeptidase mrda | W909_RS05545 | Not Available | - | 1206299 - 1208209 | 71852.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | W909_RS05550 | Not Available | - | 1208246 - 1208716 | 17610.4 |
| ribosome silencing factor | W909_RS05555 | Not Available | - | 1208718 - 1209035 | 11552.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
