Dickeya zeae EC1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya zeae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya zeae EC1

Accession NumberNZ_CP006929.1

Gene Summary

Adenine Count

1057268 bp

Thymine Count

1053435 bp

Guanine Count

1207216 bp

Cytosine Count

1214445 bp

Genome Length

4532364 bp

Protein-coding Genes

3754 genes

Non-Coding Genes

267 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ygdi/ygdr family lipoproteinW909_RS04685Not Available+1014378 - 10145997939.48
transcriptional regulator gcvaW909_RS04690Not Available+1014951 - 101587734729.7
duf423 domain-containing proteinW909_RS04695Not Available+1015961 - 101634714196.8
23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmmW909_RS04700Not Available+1016349 - 101744942082.0
flap endonuclease xniW909_RS04705Not Available-1017553 - 101831428336.9
nucleotide 5'-monophosphate nucleosidase ppnnW909_RS04710Not Available-1018376 - 101974050759.2
secy-interacting proteinW909_RS04715Not Available+1020141 - 102068920607.7
yqcc family proteinW909_RS04720Not Available+1021378 - 102169812024.4
trna pseudouridine(65) synthase trucW909_RS04725Not Available+1021701 - 102248629684.8
flavodoxinW909_RS04730Not Available+1022505 - 102295716224.1

Displaying genes 1121 – 1130 of 4021 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0017332D-Ribose-5-phosphateC5H11O8PChemical structure of D-Ribose-5-phosphate4151-19-3
Average230.1098Da
Monoisotopic230.01915384Da

Displaying 1–2 of 2 metabolites