Comamonas testosteroni TK102

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas testosteroni TK102 is a nonsporulating, Gram-negative rod-shaped bacterium that exhibits aerobic metabolic characteristics. This species is part of the Comamonas genus, which is known for its versatility in various environments, as indicated by its habitat being classified as multiple. The ability to thrive in diverse habitats suggests that C. testosteroni TK102 may play a role in various ecological niches, potentially participating in biogeochemical cycles or interactions with other microorganisms. As an aerobic organism, C. testosteroni TK102 depends on oxygen for its metabolic processes, which may influence its distribution in environments where oxygen availability varies. The absence of sporulation indicates that this strain does not form spores as a survival strategy, which may limit its resilience in extreme conditions compared to sporulating bacteria. However, its adaptation to multiple habitats suggests that it can effectively exploit available resources in its environment. Overall, the ecological role of Comamonas testosteroni TK102 may extend beyond simple nutrient cycling, potentially involving interactions with organic compounds, including those derived from anthropogenic sources, which could be significant in bioremediation applications. Further research could elucidate its specific functions and contributions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas testosteroni
StrainTK102

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Comamonas testosteroni TK102
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas testosteroni TK102


Gene Summary

Adenine Count

1156103 bp

Thymine Count

1155467 bp

Guanine Count

1875653 bp

Cytosine Count

1875480 bp

Genome Length

6062703 bp

Protein-coding Genes

5416 genes

Non-Coding Genes

182 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1517770 - 1517816Not Available
tyrosine-type recombinase/integraseO987_RS06845Not Available+1518010 - 151921846089.6
helix-turn-helix domain-containing proteinO987_RS06850Not Available-1519215 - 151959813611.4
hypothetical proteinO987_RS06855Not Available-1519601 - 152012519759.4
hypothetical proteinO987_RS29645Not Available-1520122 - 15202564891.82
hypothetical proteinO987_RS06860Not Available-1520256 - 152058512272.7
Hypothetical proteinO987_RS27530Not Available-1520585 - 152088110739.7
Hypothetical proteinO987_RS29190Not Available-1520878 - 152172631057.3
Parb-like nuclease domain proteinO987_RS06875Not Available-1521723 - 152399381873.6
hypothetical proteinO987_RS06880Not Available-1523990 - 152442116237.0

Displaying genes 1 – 10 of 5598 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

13 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001885Tetra-mu3-sulfido-tetrairon(1+)Fe4S4Chemical structure of Tetra-mu3-sulfido-tetrairon(1+)Not available
Average351.62Da
Monoisotopic351.62748Da
BASm00031644,5-dihydroxyphthalateC8H4O6Chemical structure of 4,5-dihydroxyphthalateNot available
Average196.115Da
Monoisotopic196.001885Da
BASm0003304cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylateC8H6O6Chemical structure of cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylateNot available
Average198.131Da
Monoisotopic198.0175351Da
BASm0010010(3Z)-2-oxo-4-carboxy-3-hexenedioateC7H3O7Chemical structure of (3Z)-2-oxo-4-carboxy-3-hexenedioateNot available
Average199.096Da
Monoisotopic198.9895232Da
BASm0014037Fumaric acidC4H4O4Chemical structure of Fumaric acid110-17-8
Average116.0722Da
Monoisotopic116.010958616Da
BASm0014038Malic acidC4H6O5Chemical structure of Malic acid97-67-6
Average134.0874Da
Monoisotopic134.021523302Da
BASm0014042Oxoglutaric acidC5H6O5Chemical structure of Oxoglutaric acid328-50-7
Average146.0981Da
Monoisotopic146.021523302Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm00175154-Carboxy-4-hydroxy-2-oxoadipateC7H8O8Chemical structure of 4-Carboxy-4-hydroxy-2-oxoadipateNULL
Average220.1336Da
Monoisotopic220.021917232Da

Displaying 1–10 of 13 metabolites