Rhodococcus opacus PD630

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus opacus PD630 is a Gram-positive bacterium characterized by its cocci shape and filamentous cell arrangement. This microbe is classified as an aerobic organism, indicating that it requires oxygen for growth and metabolism. R. opacus PD630 has garnered attention for its potential applications in bioremediation and bioconversion processes due to its ability to degrade various organic compounds. The filamentous arrangement of R. opacus PD630 may facilitate enhanced surface area for interactions with its environment, which is beneficial for substrate utilization. This trait, combined with its aerobic metabolism, suggests that it may thrive in environments rich in organic pollutants where oxygen is readily available. Furthermore, the ability of R. opacus PD630 to adapt to diverse substrates positions it as a promising candidate for the development of sustainable biotechnological solutions aimed at environmental cleanup. Overall, R. opacus PD630 exemplifies the versatility of Gram-positive bacteria in aerobic conditions, highlighting its potential role in ecological restoration and the mitigation of pollution in contaminated environments. Its filamentous growth form may also provide insights into microbial community dynamics, particularly in aerobic habitats where filamentous organisms can contribute to the structural complexity of biofilms and microbial mats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus opacus
StrainPD630

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus opacus PD630
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

29672 bp

Thymine Count

30786 bp

Guanine Count

57029 bp

Cytosine Count

54731 bp

Genome Length

172218 bp

Protein-coding Genes

165 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
winged helix-turn-helix domain-containing proteinPD630_RS41500Not Available-1306 - 218131322.2
class i sam-dependent methyltransferasePD630_RS38585Not Available-3541 - 422424398.8
hypothetical proteinPD630_RS38590Not Available+4809 - 527917248.3
duf6545 domain-containing proteinPD630_RS38595Not Available+5279 - 645443260.0
helix-turn-helix domain-containing proteinPD630_RS42790Not Available-6456 - 689315250.1
helix-turn-helix transcriptional regulatorPD630_RS38605Not Available-7089 - 756217093.8
hypothetical proteinPD630_RS42795Not Available+8577 - 956033595.7
cutinase family proteinPD630_RS41510Not Available-9558 - 98489893.86
hypothetical proteinPD630_RS41515Not Available+9985 - 1036213564.1
hypothetical proteinPD630_RS41520Not Available+10584 - 1167137711.9

Displaying genes 1 – 10 of 8400 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites