Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | strain F1794 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1101610 bp
Thymine Count
1095054 bp
Guanine Count
1527797 bp
Cytosine Count
1531559 bp
Genome Length
5256020 bp
Protein-coding Genes
4639 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJU80_21040 | Not Available | + | 4551950 - 4552975 | 39268.2 |
| Portal protein | CJU80_21045 | Not Available | - | 4553018 - 4554019 | 37436.4 |
| Terminase atpase subunit | CJU80_21050 | Not Available | - | 4554019 - 4555776 | 66688.0 |
| Gpo family capsid scaffolding protein | CJU80_21055 | Not Available | + | 4555946 - 4556776 | 30307.6 |
| Major capsid protein, p2 family | CJU80_21060 | Not Available | + | 4556818 - 4557852 | 38546.5 |
| Terminase endonuclease subunit | CJU80_21065 | Not Available | + | 4557856 - 4558557 | 25239.3 |
| Predicted capsid completion protein | CJU80_21070 | Not Available | + | 4558680 - 4559141 | 16912.8 |
| Tail protein x | CJU80_21075 | Not Available | + | 4559141 - 4559353 | 7668.02 |
| Holin | CJU80_21080 | Not Available | + | 4559404 - 4559718 | 11133.8 |
| Duf3380 domain-containing protein | CJU80_21085 | Not Available | + | 4559715 - 4560557 | 30592.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
