Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | strain P121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1055364 bp
Thymine Count
1055101 bp
Guanine Count
1494902 bp
Cytosine Count
1496442 bp
Genome Length
5101809 bp
Protein-coding Genes
4473 genes
Non-Coding Genes
178 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 1171833 - 1171844 | Not Available |
| Site-specific recombinase | AV641_RS05505 | Not Available | + | 1186058 - 1187677 | 59768.4 |
| hypothetical protein | AV641_RS05515 | Not Available | + | 1188111 - 1188668 | 20004.0 |
| hypothetical protein | AV641_RS05520 | Not Available | + | 1188678 - 1188902 | 8130.49 |
| Hypothetical protein | AV641_RS05525 | Not Available | + | 1188899 - 1189180 | 9892.96 |
| Repressor protein ci | AV641_RS05530 | Not Available | - | 1189304 - 1190008 | 25761.0 |
| Prophage anti-repressor | AV641_RS23000 | Not Available | + | 1190112 - 1190339 | 7951.59 |
| hypothetical protein | AV641_RS05535 | Not Available | + | 1190336 - 1190944 | 21997.0 |
| hypothetical protein | AV641_RS05540 | Not Available | + | 1191115 - 1191867 | 28525.4 |
| Hypothetical protein | AV641_RS05545 | Not Available | - | 1192564 - 1192824 | 9892.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
