Agathobacter rectalis M104/1

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis M104/1 is a Gram-positive, nonsporulating rod-shaped bacterium that thrives as a chemoheterotroph, utilizing organic compounds as its energy source. This species prefers an optimal growth temperature of 37.0°C and exhibits anaerobic metabolism, indicating its adaptation to environments devoid of oxygen. A. rectalis M104/1 is found in multiple habitats, suggesting a versatile ecological role, potentially including the human gut microbiome where anaerobic conditions prevail. The presence of this microbe in diverse environments may reflect its ability to contribute to the degradation of complex organic materials, thereby facilitating nutrient cycling. Its nonsporulating nature implies a reliance on stable conditions for survival, as it does not form spores to endure adverse environments. Understanding the metabolic capabilities and ecological niches of A. rectalis M104/1 may provide insights into its role in microbial communities, particularly in anaerobic ecosystems where it may influence the dynamics of organic matter decomposition and nutrient availability. Further studies could elucidate its interactions with other microbial species and its potential contributions to gastrointestinal health or disturbances.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
StrainM104/1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis M104/1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis M104/1


Gene Summary

Adenine Count

1026076 bp

Thymine Count

1094241 bp

Guanine Count

669768 bp

Cytosine Count

776487 bp

Genome Length

3698419 bp

Protein-coding Genes

3490 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
is66 family transposaseERE_RS00005Not Available-71 - 171162920.4
is66 family insertion sequence element accessory protein tnpbERE_RS00010Not Available-1985 - 234713719.8
hypothetical proteinERE_RS00015Not Available-2340 - 272314226.1
hypothetical proteinERE_RS00020Not Available+2883 - 317310915.8
hypothetical proteinERE_RS00025Not Available+3253 - 354310437.5
hth domain-containing proteinERE_RS00030Not Available+3530 - 36705347.53
hypothetical proteinERE_RS00035Not Available+3697 - 434725283.4
flavodoxin family proteinERE_RS00040Not Available+5356 - 588019284.5
hypothetical proteinERE_RS00045Not Available+5940 - 621010712.5
transposaseERE_RS00050Not Available+7310 - 75197799.26

Displaying genes 1 – 10 of 3547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites