Candidatus Nitrosopumilus koreensis AR1

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Nitrososphaeria

Order

Nitrosopumilales

Family

Nitrosopumilaceae

Genus

Nitrosopumilus

Description

Taxonomy

KingdomThermoproteati
PhylumNitrososphaerota
ClassNitrososphaeria
OrderNitrosopumilales
FamilyNitrosopumilaceae
GenusNitrosopumilus
SpeciesCandidatus Nitrosopumilus koreensis
StrainAR1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Nitrosopumilus koreensis AR1

NC_018655.1

Gene Summary

Adenine Count

538601 bp

Thymine Count

540771 bp

Guanine Count

279567 bp

Cytosine Count

281025 bp

Genome Length

1639964 bp

Protein-coding Genes

2001 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
glutamate racemaseNKOR_RS00005A7MXD3+218 - 97328428.4
precorrin-4 c(11)-methyltransferaseNKOR_RS00010Q58973-954 - 172428297.9
precorrin-2 c(20)-methyltransferaseNKOR_RS00015P21639-1717 - 243926558.4
precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbitNKOR_RS00020Q97WC7-2475 - 306521424.9
hypothetical proteinNKOR_RS00025Not Available-3096 - 357217878.6
ribosome rescue protein rqchNKOR_RS00030Q59020+3667 - 562273136.3
aconitase x swivel domain-containing proteinNKOR_RS00035C6A011-5600 - 598613566.4
aconitase x catalytic domain-containing proteinNKOR_RS00040O27472-5983 - 713741982.7
endonuclease iiiNKOR_RS00045Q9WYK0+7187 - 784024801.9
lamg-like jellyroll fold domain-containing proteinNKOR_RS00050Not Available+8070 - 15554268030.0

Displaying genes 1 – 10 of 2042 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

128 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da

Displaying 1–10 of 128 metabolites