Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(37)-n1)-methyltransferase trmd | HIMB5_RS00005 | Not Available | + | 15 - 704 | 25965.1 |
| 50s ribosomal protein l19 | HIMB5_RS00010 | Not Available | + | 720 - 1274 | 20500.6 |
| 3-isopropylmalate dehydratase large subunit | HIMB5_RS00015 | Not Available | + | 1285 - 2688 | 50921.8 |
| 3-isopropylmalate dehydratase small subunit | HIMB5_RS00020 | Not Available | + | 2688 - 3293 | 23237.1 |
| 3-isopropylmalate dehydrogenase | HIMB5_RS00025 | Not Available | + | 3286 - 4392 | 40546.9 |
| acyl-coa dehydrogenase c-terminal domain-containing protein | HIMB5_RS00030 | Not Available | + | 4419 - 6182 | 65978.7 |
| acyl-coa synthetase | HIMB5_RS00035 | Not Available | + | 6184 - 7800 | 61079.4 |
| alpha/beta fold hydrolase | HIMB5_RS00040 | Not Available | + | 7809 - 8582 | 28796.7 |
| dimethylsulfoniopropionate demethylase | HIMB5_RS00045 | Not Available | + | 8582 - 9688 | 41694.4 |
| aspartate-semialdehyde dehydrogenase | HIMB5_RS00050 | Not Available | + | 9706 - 10713 | 37277.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.