Cellulophaga algicola DSM 14237

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Cellulophaga

Description

Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) is an ice-dwelling (sympagic), strictly aerobic, chemoheterotrophic Gram-negative bacterium commonly associated with marine diatoms and isolated from strips of ice algae. Cells are rod-shaped with either rounded or tapered ends. Gliding motility is present. Colonies have yellow-orange pigmentation and a compact center with a spreading edge possessing lighter pigmentation. C. algicola produces extracellular enzymes which degrade agar and other complex compounds and acid is formed oxidatively from D-galactose, D-glucose, D-fructose, sucrose, cellobiose, lactose and mannitol. It can grow between 0 and 10% NaCl, with best growth in the presence of about 2%NaCl. C. algicola grows between 2 and 28 degrees Celsius, with the most rapid growth at about 15-20 degrees Celsius on agar media and at about 20-25 degrees Celsius in liquid media. Optimal pH for growth is about 7.5. (Adapted from PMID: 11034497). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCellulophaga
SpeciesCellulophaga algicola
StrainDSM 14237

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Cellulophaga algicola DSM 14237
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature15
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNo

Genome Summary

Cellulophaga algicola DSM 14237


Gene Summary

Adenine Count

1614004 bp

Thymine Count

1623739 bp

Guanine Count

826648 bp

Cytosine Count

823962 bp

Genome Length

4888353 bp

Protein-coding Genes

4223 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaCELAL_RS00005Not Available+112 - 153654226.3
low molecular weight protein-tyrosine-phosphataseCELAL_RS00010Not Available+1546 - 200117002.3
sam-dependent methyltransferaseCELAL_RS00015Not Available+2012 - 272826514.3
hypothetical proteinCELAL_RS00020Not Available-2774 - 340923749.8
endolytic transglycosylase mltgCELAL_RS00025Not Available-3560 - 460339563.3
gnat family n-acetyltransferaseCELAL_RS00030Not Available-4603 - 512720058.2
diaminopimelate epimeraseCELAL_RS00035Not Available-5120 - 589628336.8
s1c family serine proteaseCELAL_RS00040Not Available+6027 - 742149966.4
glyceraldehyde-3-phosphate dehydrogenaseCELAL_RS00045Not Available+7547 - 899553686.8
hypothetical proteinCELAL_RS00050Not Available+9075 - 970123988.7

Displaying genes 1 – 10 of 4287 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

257 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 257 metabolites