Thermaerobacter marianensis DSM 12885

Gram-positiveBacilliNon-motileAerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiales Family XVII. Incertae Sedis

Genus

Thermaerobacter

Description

Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) is a strictly aerobic, thermophilic, marine Gram-positive bacterium, originally isolated from the deepest part in the western Pacific Ocean (Mariana Trench) at the depth of 10, 897 m. The cells of T. marianensis are generally rod-shaped (0.3-0.6 x 2-7 um), straight to slightly curved with rounded ends. Motility and flagella have not been observed, but genes for biosynthesis and assembly of flagella have been identified. It is typical marine bacterium and requires sea salts (0.5-5%, optimum 2%) in media for good growth. The temperature range for growth is between 50 and 80 degrees Celsius, with an optimum at 75 degrees Celsius. The pH range for growth is between 5.4-9.5, with an optimum at pH 7.0-7.5. T. marianensis utilizes carbohydrates like starch, xylan, chitin, maltose, maltotriose, cellobiose, lactose, trehalose, sucrose, glucose, galactose, xylose, mannitol, inositol. It is also able to grow on amino acids like casamino acids, valine, isoleucine, cysteine, proline, serine, threonine, asparagine, glutamine, aspartate, glutamate, lysine, arginine and histidine. T. marianensis is able to grow well on various carboxylic acids like propionate, 2-aminobutyric acid, malate, pyruvate, tartarate, succinate, lactate, acetate and glycerol (Adapted from: http://standardsingenomics.org/index.php/sigen/article/view/sigs.1373474). (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiales Family XVII. Incertae Sedis
GenusThermaerobacter
SpeciesThermaerobacter marianensis
StrainDSM 12885

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Thermaerobacter marianensis DSM 12885
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature74
Temperature rangeHyperthermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNo

Genome Summary

Thermaerobacter marianensis DSM 12885


Gene Summary

Adenine Count

391858 bp

Thymine Count

390943 bp

Guanine Count

1032623 bp

Cytosine Count

1029272 bp

Genome Length

2844696 bp

Protein-coding Genes

2343 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+14801 - 14846Not Available
Site-specific recombinaseTMAR_RS12460Not Available-14938 - 1604743182.7
Trna-ala;Not AvailableNot Available+16087 - 16163Not Available
duf3800 domain-containing proteinTMAR_RS00080Not Available-16322 - 1698426172.5
imma/irre family metallo-endopeptidaseTMAR_RS00085Not Available-17320 - 1778417226.0
Immunity repressor proteinTMAR_RS11940Not Available-17771 - 1816614703.3
helix-turn-helix transcriptional regulatorTMAR_RS00095Not Available+18324 - 185458426.18
helix-turn-helix transcriptional regulatorTMAR_RS00100Not Available+18868 - 1935918082.7
hypothetical proteinTMAR_RS00105Not Available+19356 - 195808978.06
hypothetical proteinTMAR_RS00110Not Available+19595 - 1994813598.4

Displaying genes 1 – 10 of 2421 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

150 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm00008001,8-diazacyclotetradecane-2,9-dioneC12H22N2O2Chemical structure of 1,8-diazacyclotetradecane-2,9-dioneNot available
Average226.32Da
Monoisotopic226.168127956Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 150 metabolites