Truepera radiovictrix DSM 17093

CocciNon-motileObligate aerobic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Trueperales

Family

Trueperaceae

Genus

Truepera

Description

Truepera radiovictrix was isolated from a hot spring within a geothermal area located along the dry bed of a stream known as Ribeira Quente, on the Island of Sao Miguel in the Azores, Portugal. The hot springs in this area discharge neutral to slightly alkaline water that may reach the boiling point. Strain RQ-24T was isolated from a runoff with a temperature of 52 degrees Celsius and a pH of 7.0. The red-pigmented bacteria formed non-motile spherical cells about 1.25 to 2.0 um in diameter, most of which formed pairs or tetrads. The cytoplasm has a fibrillar nucleoid and tubular structures of unknown nature. The optimum pH of strain RQ-24T was between 7.5 and 9.5, but growth continues until pH 11.2. The optimal temperature is about 50 degrees Celsius, and maximal growth occurs in 1% NaCl, although it continues to grow in up to 6% NaCl. It is extremely resistant to ionizing radiation; 60% of the cells survive 5.0 kGy. It is aerobic, the major respiratory quinone is menaquinone 8 and no peptidoglycan was detected, although the cell wall is quite elaborate (adapted from PMID 15927420). (EBI Integr8)

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderTrueperales
FamilyTrueperaceae
GenusTruepera
SpeciesTruepera radiovictrix
StrainDSM 17093

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeThermophilic
HabitatFresh water- Hot spring
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Truepera radiovictrix DSM 17093


Gene Summary

Adenine Count

518878 bp

Thymine Count

519917 bp

Guanine Count

1112418 bp

Cytosine Count

1109185 bp

Genome Length

3260398 bp

Protein-coding Genes

2990 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaTRAD_RS00005Not Available+166 - 150050592.4
dna polymerase iii subunit betaTRAD_RS00010Not Available+1830 - 292138868.4
phosphopyruvate hydrataseTRAD_RS00015Not Available+3121 - 438944966.3
pyruvate kinaseTRAD_RS00020Not Available+4389 - 584052144.9
50s ribosomal protein l9TRAD_RS00025Not Available-5962 - 641116617.2
30s ribosomal protein s18TRAD_RS00030Not Available-6408 - 669211004.5
single-stranded dna-binding proteinTRAD_RS00035Not Available-6693 - 754130940.3
30s ribosomal protein s6TRAD_RS00040Not Available-7590 - 794013366.8
tvp38/tmem64 family proteinTRAD_RS00045Not Available+8116 - 883826168.7
ycii family proteinTRAD_RS00050Not Available-9119 - 941510844.1

Displaying genes 1 – 10 of 3044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0004531(6S)-NADHXC21H29N7O15P2Chemical structure of (6S)-NADHXNot available
Average681.446Da
Monoisotopic681.1207844Da
BASm0004532(6R)-NADHXC21H29N7O15P2Chemical structure of (6R)-NADHXNot available
Average681.446Da
Monoisotopic681.1207844Da
BASm0004533(6S)-NADPHXC21H28N7O18P3Chemical structure of (6S)-NADPHXNot available
Average759.409Da
Monoisotopic759.0725624Da
BASm0004534(6R)-NADPHXC21H28N7O18P3Chemical structure of (6R)-NADPHXNot available
Average759.409Da
Monoisotopic759.072562403Da

Displaying 1–4 of 4 metabolites