Streptomyces griseus subsp. griseus NBRC 13350

Gram-positiveTailedMotileAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

The genus Streptomyces consists of soil and water Gram positive filamentous bacteria well known for their ability to produce complex secondary metabolites including many antibiotics. Additionally they undergo complex multicellular development, with spores germinating to form a branched, multinucleoid substrate mycelium, which then produces an aerial mycelium which septates into uninucleoid spores. Streptomyces is also unusual in having linear chromosomes with terminal inverted repeats with terminal proteins covalently bound to their 5' ends.Streptomycin, the first aminoglycoside antibiotic, was discovered more than 60 years ago, is still used to treat tuberculosis and is produced commercially by S.griseus. Analysis of the genome of strain JCM 4626 / NBRC 13350 indicates the presence of 34 gene clusters or genes for the biosynthesis of known or unknown secondary metabolites. (HAMAP: STRGG)

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces griseus
StrainNBRC 13350

Profile

Physiology
Gram staining propertiesPositive
ShapeTailed
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Streptomyces griseus subsp. griseus NBRC 13350
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationSporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Streptomyces griseus subsp. griseus NBRC 13350


Gene Summary

Adenine Count

1191878 bp

Thymine Count

1181548 bp

Guanine Count

3082315 bp

Cytosine Count

3090188 bp

Genome Length

8545929 bp

Protein-coding Genes

7126 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinSGR_RS14070Not Available-3351593 - 335204816082.2
hypothetical proteinSGR_RS14075Not Available+3352245 - 335306929426.7
Hypothetical proteinSGR_RS14080Not Available+3353066 - 33532697180.71
hypothetical proteinSGR_RS14085Not Available-3353333 - 335363810121.8
Head-to-tail connector complex proteinSGR_RS14090Not Available+3353942 - 335435214741.5
Major tail proteinSGR_RS14095Not Available+3354480 - 335508521512.2
Tail assembly chaperoneSGR_RS14100Not Available+3355164 - 335545410603.4
Tail assembly chaperoneSGR_RS14105Not Available+3355520 - 335584311613.6
hypothetical proteinSGR_RS14110Not Available-3355936 - 335634914884.0
hypothetical proteinSGR_RS14115Not Available+3356385 - 335707124915.2

Displaying genes 1 – 10 of 7232 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

164 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001254naphthalene-1,3,6,8-tetrolC10H8O4Chemical structure of naphthalene-1,3,6,8-tetrolNot available
Average192.17Da
Monoisotopic192.042258738Da
BASm0001369peroxynitriteNO3Chemical structure of peroxynitrite19059-14-4
Average62.0049Da
Monoisotopic61.987817871Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 164 metabolites