Rickettsia rickettsii str. Iowa

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsia rickettsii is the causative agent of the Rocky Mountain spotted fever (RMSF) and is the prototype bacterium in the spotted fever group of rickettsiae. It is transmitted by hard ticks (Ixodidae). Rocky Mountain spotted fever is the most severe and most frequently reported rickettsial illness in the United States. It also occurs in Mexico and in Central and South America. The symptoms of the Rocky Mountain spotted fever may follow within one to fourteen days after the victim has been bitten. There is a high fever, with chills, muscle aches and a severe headache concentrated in the forehead area. Also, eyes may become red, muscles may feel weak and there may be body swelling. A rash also forms around the third to fifth day. RMSF affects about 800 people in the United States each year. Before anti-biotic treatment was available 20 to 30 percent of the cases were fatal. However, with the discovery of an antibiotic, the suffering and danger has decreased; it causes death in about 15 percent of its victims over age 70, and in only about two percent of infected victims under age 30. If an antibiotic is started rapidly, the mortality rate is ten percent.Rickettsia rickettsii (strain Iowa) is avirulent and defective in cell lysis. It does not induce fever in a guinea pig model of infection. A deletion truncates the rompA gene that codes for a major surface antigen. In addition R. rickettsii (strain Iowa) is defective in the processing of rOmpB, another major surface antigen. These factors most likely contribute to the avirulence of this strain. (HAMAP: RICRO)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia rickettsii
Strainstr. Iowa

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Rickettsia rickettsii str. Iowa
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Rickettsia rickettsii str. Iowa


Gene Summary

Adenine Count

427775 bp

Thymine Count

428935 bp

Guanine Count

207272 bp

Cytosine Count

204219 bp

Genome Length

1268201 bp

Protein-coding Genes

1411 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pyruvate, water dikinase regulatory proteinRRIOWA_RS00005B0BVQ7+1 - 82231651.4
thioredoxinRRIOWA_RS00010Q92JR5+1082 - 139911995.6
abc transporter atp-binding proteinRRIOWA_RS00015Q48479+1409 - 215827716.7
abc transporter permeaseRRIOWA_RS00020Q50862+2159 - 293529910.0
fad-dependent oxidoreductaseRRIOWA_RS00025Q9ZED6+2932 - 6033118206.0
type ii toxin-antitoxin system pemk/mazf family toxinRRIOWA_RS00030Not Available-6077 - 63168958.82
acyl-acp--udp-n-acetylglucosamine o-acyltransferaseRRIOWA_RS00035C3PM36-6443 - 723728335.2
3-hydroxyacyl-acp dehydratase fabzRRIOWA_RS00040C4K0C2-7244 - 768116291.1
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseRRIOWA_RS00045P32202-7877 - 891436796.7
patatin-like phospholipase family proteinRRIOWA_RS09155Not Available+9612 - 998614288.1

Displaying genes 1 – 10 of 1452 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

628 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001462ubiquinone-0C9H10O4Chemical structure of ubiquinone-0605-94-7
Average182.1733Da
Monoisotopic182.057908808Da

Displaying 1–10 of 628 metabolites