Gluconacetobacter diazotrophicus PA1 5

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Gluconacetobacter

Description

Gluconacetobacter diazotrophicus PA1 5 is a Gram-negative, rod-shaped bacterium that exists primarily as single cells and is classified as an aerobic diazotroph. This microbe exhibits an optimal growth temperature of 30°C and is associated with host environments, suggesting a potential symbiotic relationship with certain plant species. As a diazotroph, G. diazotrophicus PA1 5 possesses the ability to fix atmospheric nitrogen, which can be pivotal for enriching the nitrogen content in its habitat. The Gram-negative nature of this organism indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, which may contribute to its adaptability in host-associated environments. Its rod shape and solitary cell arrangement are characteristic of various bacteria within the family Acetobacteraceae, which often play significant roles in fermentation processes. The aerobic metabolism of G. diazotrophicus PA1 5 allows it to thrive in oxygen-rich environments, potentially enhancing its nitrogen-fixing capabilities. This trait not only assists in bolstering soil fertility but may also facilitate plant growth by improving nutrient availability. The interplay between its nitrogen-fixing ability and the aerobic conditions of its habitat underscores the potential for G. diazotrophicus PA1 5 to contribute to sustainable agricultural practices, particularly in enhancing the resilience of crops to nutrient-deficient soils.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusGluconacetobacter
SpeciesGluconacetobacter diazotrophicus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Gluconacetobacter diazotrophicus PA1 5
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceDiazotroph
PathogenicityNot Available

Genome Summary

Gluconacetobacter diazotrophicus PA1 5


Gene Summary

Adenine Count

664608 bp

Thymine Count

659404 bp

Guanine Count

1305319 bp

Cytosine Count

1314832 bp

Genome Length

3944163 bp

Protein-coding Genes

3643 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
TransposaseGDI_RS04980Not Available-1058482 - 105971046320.4
AttlNot AvailableNot Available+1059750 - 1059761Not Available
yfdx family proteinGDI_RS04990Not Available+1060095 - 106081124963.6
ncs1 family nucleobase:cation symporter-1GDI_RS04995Not Available-1060846 - 106228551637.0
TransposaseGDI_RS05000Not Available+1062475 - 106274110094.3
Issod13, transposaseGDI_RS05005Not Available+1062755 - 106308413243.5
transposaseGDI_RS19665Not Available-1063136 - 106365018688.6
Dna-invertaseGDI_RS05020Not Available+1063690 - 106412715933.9
Tail length tape measure proteinGDI_RS18900Not Available+1064362 - 106507225948.9
Putative resolvaseGDI_RS05025Not Available+1065154 - 106578923529.9

Displaying genes 1 – 10 of 3762 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1676 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da

Displaying 1–10 of 1676 metabolites