Herpetosiphon aurantiacus DSM 785

Gram-negativeFilamentousMotileAerobic

Kingdom

Bacillati

Phylum

Chloroflexota

Class

Chloroflexia

Order

Herpetosiphonales

Family

Herpetosiphonaceae

Genus

Herpetosiphon

Description

The phylum Chloroflexi, which is divided into two orders, the Chloroflexales and the Herpetosiphonales, is a deep-branching lineage of the Bacteria. Members of the former order synthesize BChls and are obligately or facultatively phototrophic, while members of the latter order do not synthesize BChls and are not phototrophs. Although members of both groups are designated as Gram-negative, they do not synthesize lipopolysaccharide and thus do not possess outer membranes.Herpetosiphon aurantiacus ATCC 23779 was isolated from Birch Lake, Minnesota USA. It is an ensheathed, gliding bacterium; the sheathes move with the bacterium which is unflagellated. It divides by septum formation and does not contain chlorophyll. It is the type strain (adapted from PubMed 5669912 and 15340781). (HAMAP: HERA2)

Taxonomy

KingdomBacillati
PhylumChloroflexota
ClassChloroflexia
OrderHerpetosiphonales
FamilyHerpetosiphonaceae
GenusHerpetosiphon
SpeciesHerpetosiphon aurantiacus
StrainATCC 23779

Profile

Physiology
Gram staining propertiesNegative
ShapeFilamentous
MobilityYes
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganoheterotroph
PathogenicityNo

Genome Summary

Herpetosiphon aurantiacus DSM 785


Gene Summary

Adenine Count

1559178 bp

Thymine Count

1568695 bp

Guanine Count

1613493 bp

Cytosine Count

1605221 bp

Genome Length

6346587 bp

Protein-coding Genes

5083 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinHAUR_RS25845Not Available+94 - 241285976.3
hypothetical proteinHAUR_RS25850Not Available+2536 - 27699465.69
jab domain-containing proteinHAUR_RS25855Not Available+2956 - 345318228.3
swim zinc finger family proteinHAUR_RS25860Not Available+3469 - 399918630.4
hypothetical proteinHAUR_RS25865Not Available+4098 - 452015654.8
hypothetical proteinHAUR_RS25870Not Available-4800 - 9140153922.0
endonuclease/exonuclease/phosphatase family proteinHAUR_RS25875Not Available-9170 - 1017736789.3
potassium transporter kupHAUR_RS25880Not Available-10585 - 1250469805.2
hypothetical proteinHAUR_RS25885Not Available+13035 - 1367022727.0
ftsk/spoiiie domain-containing proteinHAUR_RS25890Not Available+13667 - 1508551096.6

Displaying genes 1 – 10 of 5491 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1743 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da

Displaying 1–10 of 1743 metabolites