Phocaeicola vulgatus ATCC 8482

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus ATCC 8482 is a Gram-positive, rod-shaped bacterium that primarily exists in a single-cell arrangement. This microbe is classified as an anaerobe, meaning it thrives in environments devoid of oxygen. It is host-associated, indicating a relationship with a host organism, where it likely contributes to the host's microbiome. As a member of the gut microbiota, P. vulgatus ATCC 8482 plays a role in the fermentation of complex carbohydrates, thereby aiding in digestion and nutrient absorption. The anaerobic nature of this bacterium suggests it may engage in metabolic processes that produce short-chain fatty acids, which are essential for maintaining gut health and providing energy to colonocytes. The ability of P. vulgatus to persist in anaerobic environments signifies its adaptation to the gastrointestinal tract, where oxygen levels are low. This adaptation highlights the importance of anaerobic microorganisms in the overall function of the gut ecosystem, which is essential for host health. Further studies on P. vulgatus may elucidate its specific contributions to host metabolism and its interactions within the gut microbiome, offering insights into the complex dynamics of host-microbe relationships.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainATCC 8482

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus ATCC 8482
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus ATCC 8482


Gene Summary

Adenine Count

1494665 bp

Thymine Count

1489581 bp

Guanine Count

1084578 bp

Cytosine Count

1094365 bp

Genome Length

5163189 bp

Protein-coding Genes

4074 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+3599483 - 3599495Not Available
Major capsid proteinBVU_RS14285Not Available-3608142 - 360983062004.5
1_nc_021802: phage prohead protease proteinBVU_RS14290Not Available-3609856 - 361090539416.8
Portal proteinBVU_RS14295Not Available-3610859 - 361228654725.9
Terminase large subunitBVU_RS14300Not Available-3612415 - 361443377552.2
Terminase small subunitBVU_RS14305Not Available-3614497 - 361504220689.6
Putative nad dependent epimeraseBVU_RS14310Not Available-3615138 - 361593529937.7
PrimaseBVU_RS14315Not Available-3615993 - 361677230047.8
Aaa-atpaseBVU_RS14320Not Available-3616814 - 361738622041.2
hypothetical proteinBVU_RS14325Not Available-3617500 - 361825229312.5

Displaying genes 1 – 10 of 4204 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014045Propionic acidC3H6O2Chemical structure of Propionic acid79-09-4
Average74.0785Da
Monoisotopic74.036779436Da

Displaying 1–1 of 1 metabolites