Jannaschia sp. CCS1

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Jannaschia

Description

Jannaschia sp. strain CCS1 is a member of the Roseobacter lineage (alpha-Proteobacteria), an ecologically relevant taxon of marine bacteria abundant in coastal and open ocean surface waters. CCS1 is an aerobic anoxygenic phototroph (AAnP), that is, it is incapable of anaerobic photosynthesis, and performs efficient photoinduced electron transfer only under aerobic conditions. However it still uses bacteriochlorophyll a to harvest energy from light without oxygen formation. AAnPs have recently been found in ocean surface waters, where they make up a significant fraction of the marine bacterioplankton community, are responsible for a share of the oceanic photosynthetic electron transport flux, and have important implications for the ocean carbon cycle. Jannaschia CCS1 was isolated from Pacific coastal waters on low-nutrient seawater medium. It is motile, grows slowly, and like other marine AAnPs, produces bacteriochlorophyll a when grown in the dark. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusJannaschia
SpeciesJannaschia sp. CCS1
StrainCCS1

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Jannaschia sp. CCS1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains
SporulationNonsporulating
Energy sourcePhototroph- Heterotroph
PathogenicityNo

Genome Summary

Jannaschia sp. CCS1


Gene Summary

Adenine Count

810457 bp

Thymine Count

816031 bp

Guanine Count

1360187 bp

Cytosine Count

1331302 bp

Genome Length

4317977 bp

Protein-coding Genes

4250 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
f0f1 atp synthase subunit deltaJANN_RS05305Not Available+1000850 - 100141019869.1
f0f1 atp synthase subunit alphaJANN_RS05310Not Available+1001410 - 100294855029.7
f0f1 atp synthase subunit gammaJANN_RS05315Not Available+1002961 - 100385132332.7
f0f1 atp synthase subunit betaJANN_RS05320Not Available+1003869 - 100529350559.3
f0f1 atp synthase subunit epsilonJANN_RS05325Not Available+1005422 - 100582013825.4
h-type lectin domain-containing proteinJANN_RS05330Not Available+1005970 - 100632012995.0
hypothetical proteinJANN_RS05335Not Available+1006402 - 100697419329.3
ribose-phosphate pyrophosphokinaseJANN_RS05340Not Available-1006980 - 100800837012.8
2-hydroxychromene-2-carboxylate isomeraseJANN_RS05345Not Available+1008141 - 100874021442.3
alpha/beta fold hydrolaseJANN_RS05350Not Available+1008737 - 100949826788.4

Displaying genes 1091 – 1100 of 4386 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

67 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0001415beta-L-rhamnoseC6H12O5Chemical structure of beta-L-rhamnoseNot available
Average164.1565Da
Monoisotopic164.0684735Da
BASm0001463alpha-L-rhamnoseC6H12O5Chemical structure of alpha-L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.068473494Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 67 metabolites