Jannaschia sp. CCS1

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Jannaschia

Description

Jannaschia sp. strain CCS1 is a member of the Roseobacter lineage (alpha-Proteobacteria), an ecologically relevant taxon of marine bacteria abundant in coastal and open ocean surface waters. CCS1 is an aerobic anoxygenic phototroph (AAnP), that is, it is incapable of anaerobic photosynthesis, and performs efficient photoinduced electron transfer only under aerobic conditions. However it still uses bacteriochlorophyll a to harvest energy from light without oxygen formation. AAnPs have recently been found in ocean surface waters, where they make up a significant fraction of the marine bacterioplankton community, are responsible for a share of the oceanic photosynthetic electron transport flux, and have important implications for the ocean carbon cycle. Jannaschia CCS1 was isolated from Pacific coastal waters on low-nutrient seawater medium. It is motile, grows slowly, and like other marine AAnPs, produces bacteriochlorophyll a when grown in the dark. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusJannaschia
SpeciesJannaschia sp. CCS1
StrainCCS1

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Jannaschia sp. CCS1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains
SporulationNonsporulating
Energy sourcePhototroph- Heterotroph
PathogenicityNo

Genome Summary

Jannaschia sp. CCS1


Gene Summary

Adenine Count

810457 bp

Thymine Count

816031 bp

Guanine Count

1360187 bp

Cytosine Count

1331302 bp

Genome Length

4317977 bp

Protein-coding Genes

4250 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Large packaging proteinJANN_RS08265Not Available+1618672 - 162001548232.2
Portal proteinJANN_RS08270Not Available+1620105 - 162126541993.0
hypothetical proteinJANN_RS08275Not Available+1621262 - 16215109102.03
Putative prohead proteaseJANN_RS08280Not Available+1621520 - 162207120411.2
Phage major capsid proteinJANN_RS08285Not Available+1622120 - 162330142148.4
Dna packaging/head-tail-connectorJANN_RS08290Not Available+1623464 - 162405120977.1
phage head closure proteinJANN_RS08295Not Available+1624048 - 162437411824.2
P012JANN_RS08300Not Available+1624371 - 162478114007.4
Gene transfer aget (gta) orfg9-like phage major tail proteinJANN_RS08305Not Available+1624823 - 162523614352.8
gene transfer agent family proteinJANN_RS08310Not Available+1625239 - 162555611091.5

Displaying genes 1 – 10 of 4386 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1782 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da

Displaying 1–10 of 1782 metabolites