Hahella chejuensis KCTC 2396

Gram-negativeBacilliMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Hahellaceae

Genus

Hahella

Description

Hahella chejuensis strain KCTC 2396 is a marine red-pigmented gammaproteobacterium belonging to the Oceanospiralles clade. It was originally isolated from the coastal marine sediment of the southernmost island in Korea. It consists of a single circular chromosome and contains 6783 predicted genes. H.chejuensis is a heterotrophic organism living on various resources from mineral to organic materials and even other aquatic organisms. It produces a red pigment, identified as prodigiosin, which has a very efficient lytic activity against the dinoflagellate Cochlodinium polykrikoides. Increases in the population of certain dinoflagellates result in phenomena called algal blooms or red tides, which have become more frequent in recent years throughout the world in the coastal waters. Red tides affect the health of human and marine organisms but also regional economies and marine ecosystems. Hahella chejuensis possesses a complete repertoire of enzyme for central carbon metabolism, including glycolysis, pentose phosphate pathway and TCA cycle as well as those required for biosynthesis of nucleotides and 20 amino acids. Two sets of genes coding for flagellar biosynthesis, type III secretion systems and F0F1-type ATP synthesis have been identified. This multiplicity is more likely to originate from horizontal transfer rather than from a gene duplication inside H.chejuensis genome. Horizontal gene transfer seems to have played an essential role in shaping H.chejuensis as it appears to have at least 69 genomic islands. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHahellaceae
GenusHahella
SpeciesHahella chejuensis
StrainKCTC 2396

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Hahella chejuensis KCTC 2396
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Hahella chejuensis KCTC 2396


Gene Summary

Adenine Count

1663241 bp

Thymine Count

1665180 bp

Guanine Count

1938466 bp

Cytosine Count

1948380 bp

Genome Length

7215267 bp

Protein-coding Genes

6205 genes

Non-Coding Genes

204 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+371860 - 371888Not Available
Diguanylate cyclaseHCH_RS01655Not Available+383590 - 38498453072.7
hypothetical proteinHCH_RS34085Not Available-385309 - 38565912315.8
hypothetical proteinHCH_RS01665Not Available+385752 - 38607812829.5
Hypothetical proteinHCH_RS01670Not Available-386106 - 38719138014.8
Hypothetical proteinHCH_RS01675Not Available-387167 - 38788026338.7
Tail-collar fiber proteinHCH_RS01680Not Available-387877 - 38839818864.2
Hypothetical proteinHCH_RS01685Not Available-388395 - 38929431743.8
Putative tail fiber assembly chaperoneHCH_RS32030Not Available-389294 - 38963513131.4
Tail fiber proteinHCH_RS32035Not Available-389652 - 39146666104.0

Displaying genes 1 – 10 of 6409 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1840 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da

Displaying 1–10 of 1840 metabolites