Syntrophotalea carbinolica DSM 2380

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Desulfuromonadales

Family

Syntrophotaleaceae

Genus

Syntrophotalea

Description

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderDesulfuromonadales
FamilySyntrophotaleaceae
GenusSyntrophotalea
SpeciesSyntrophotalea carbinolica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Syntrophotalea carbinolica DSM 2380

NC_007498.2

Gene Summary

Adenine Count

821021 bp

Thymine Count

824461 bp

Guanine Count

1012461 bp

Cytosine Count

1007950 bp

Genome Length

3665893 bp

Protein-coding Genes

3180 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaPCAR_RS00565Not Available+78 - 143050879.5
dna polymerase iii subunit betaPCAR_RS00570Not Available+1680 - 279841897.6
dna replication/repair protein recfPCAR_RS00575Not Available+2856 - 394742015.6
dna topoisomerase (atp-hydrolyzing) subunit bPCAR_RS00580Not Available+3964 - 635189304.0
dna gyrase subunit aPCAR_RS00585Not Available+6419 - 892693242.8
tetratricopeptide repeat proteinPCAR_RS00590Not Available+8856 - 973734051.2
nad(p)h-dependent glycerol-3-phosphate dehydrogenasePCAR_RS00595Not Available+9750 - 1075136188.0
endonuclease/exonuclease/phosphatase family proteinPCAR_RS17555Not Available+10781 - 1151527399.0
endonuclease iiiPCAR_RS00605Not Available+11641 - 1229124222.5
penicillin-binding protein 1aPCAR_RS00610Not Available-12298 - 1469188046.9

Displaying genes 1 – 10 of 3244 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1655 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001462ubiquinone-0C9H10O4Chemical structure of ubiquinone-0605-94-7
Average182.1733Da
Monoisotopic182.057908808Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 1655 metabolites