Helicobacter pylori strain SV380_1

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain SV380_1 is a Gram-negative bacterium characterized by its distinctive spirilla shape and single-cell arrangement. This microbe thrives in a microaerophilic environment, indicating its requirement for reduced oxygen levels, which aligns with its natural habitat associated with host organisms. Optimal growth occurs at a temperature of 37.0°C, a condition typical for many mesophilic pathogens that colonize the human gastrointestinal tract. As a host-associated microbe, H. pylori strain SV380_1 has adapted to survive within the complex microenvironment of the stomach, where it may play a role in various physiological processes. The microaerophilic nature of this strain suggests that it occupies niches within the gastric mucosa that are less accessible to fully aerobic bacteria, thus contributing to its persistence in a competitive microbial community. Understanding the ecological role of H. pylori strain SV380_1 further illuminates the intricate relationships between host factors, microbial behavior, and environmental conditions. This microbe's adaptation to host-associated habitats and specific oxygen requirements underscores its potential impact on the microbial ecology of the gastrointestinal tract, highlighting the importance of studying such strains to unravel the complexities of host-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain SV380_1

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain SV380_1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain SV380_1


Gene Summary

Adenine Count

493515 bp

Thymine Count

494837 bp

Guanine Count

319584 bp

Cytosine Count

315788 bp

Genome Length

1624379 bp

Protein-coding Genes

1481 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+498 - 2007Not Available
23s ribosomal rnaNot AvailableNot Available+1140 - 4029Not Available
cag pathogenicity island proteinBZK25_00005Not Available-1 - 3000116193.0
5s ribosomal rnaNot AvailableNot Available+4267 - 4384Not Available
sodium:calcium antiporterBZK25_00010Not Available-3015 - 458060550.7
cag pathogenicity island proteinBZK25_00015Not Available-4632 - 623957731.4
cag pathogenicity island proteinBZK25_00020Not Available-6244 - 700229169.5
cag pathogenicity island proteinBZK25_00025Not Available+7382 - 803824606.2
cag pathogenicity island proteinBZK25_00030Not Available+8074 - 891632389.8
cag pathogenicity island proteinBZK25_00035Not Available-9118 - 971723754.4

Displaying genes 1 – 10 of 1523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites