Pseudomonas chlororaphis strain PCL1601 cnt25

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis strain PCL1601 cnt25 is a Gram-negative, rod-shaped bacterium that primarily inhabits the nodules of Chamaecytisus albus, as well as the rhizosphere and root nodules of various plants. This strain contributes to the complex microbial community associated with plant roots, potentially influencing plant health and growth through its interactions in these specialized habitats. The rod shape of P. chlororaphis strain PCL1601 cnt25 is characteristic of the Pseudomonas genus, which is known for its metabolic versatility and ability to thrive in diverse environments. The specific association of this strain with root nodules suggests a potential role in plant-microbe interactions, which may include promoting nutrient availability or enhancing plant stress resistance. Additionally, the presence of Pseudomonas species in the rhizosphere is often linked to beneficial effects on plant development, such as the production of phytohormones or the suppression of plant pathogens. Understanding the precise mechanisms by which P. chlororaphis strain PCL1601 cnt25 interacts with its plant hosts and neighboring microbial communities may provide insights into its ecological role and potential applications in agricultural practices. This highlights the importance of studying such microorganisms in the context of sustainable agriculture and soil health management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainstrain PCL1601 cnt25

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis strain PCL1601 cnt25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnodules of Chamaecytisus albus; rhizosphere; root nodules
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas chlororaphis strain PCL1601 cnt25


Gene Summary

Adenine Count

1227924 bp

Thymine Count

1230209 bp

Guanine Count

2152125 bp

Cytosine Count

2145186 bp

Genome Length

6755444 bp

Protein-coding Genes

5756 genes

Non-Coding Genes

245 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+258519 - 258545Not Available
integraseBTN82_01145Not Available-268003 - 26898336596.4
hypothetical proteinBTN82_01150Not Available-269274 - 2695499384.96
AttlNot AvailableNot Available+269625 - 269636Not Available
hypotheticalBTN82_01155Not Available-269895 - 27120745743.3
IntegraseBTN82_01160Not Available-271537 - 27268543655.6
Duf4224 domain-containing proteinBTN82_01165Not Available-272682 - 2728947941.42
hypothetical proteinBTN82_01170Not Available-272999 - 27328910915.0
Toprim domain-containing proteinBTN82_01175Not Available-273305 - 276091105746.0
Hypothetical proteinBTN82_01180Not Available-276094 - 2763278796.74

Displaying genes 1 – 10 of 6001 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites