Alistipes putredinis

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes putredinis is a Gram-negative bacterium, notable for its contribution to the microbiota of the human gastrointestinal tract. As a member of the Bacteroidetes phylum, this microbe is characterized by its rod-shaped morphology. A. putredinis has garnered interest in microbiological research due to its association with various aspects of gut health and its potential role in the fermentation of complex carbohydrates. The Gram-negative nature of A. putredinis suggests a distinctive cellular structure, featuring an outer membrane that includes lipopolysaccharides, which can influence host interactions. This structural characteristic may play a role in the microbe's survival and function within the competitive environment of the gut microbiome. While specific pathogenicity, host interactions, and ecological roles of A. putredinis require further elucidation, its presence in the gut suggests that it may contribute to nutrient metabolism and the overall homeostasis of the intestinal ecosystem. The metabolic capabilities of A. putredinis, particularly in relation to polysaccharide degradation, underscore its potential significance in maintaining gut health and influencing host metabolic profiles. Further research into this bacterium could deepen our understanding of the complex interdependencies within the gut microbiome and their implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes putredinis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes putredinis


Gene Summary

Adenine Count

534499 bp

Thymine Count

548892 bp

Guanine Count

653819 bp

Cytosine Count

633207 bp

Genome Length

2372256 bp

Protein-coding Genes

2038 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nad-binding oxidoreductaseBHV66_00005Not Available+1 - 78628739.7
glutamate synthase (nadph), homotetramericBHV66_00010Not Available+890 - 228450004.2
hypothetical proteinBHV66_00015Not Available+2298 - 286420227.2
adp-heptose--lps heptosyltransferaseBHV66_00020Not Available-3047 - 407838507.2
hypothetical proteinBHV66_00025Not Available-4062 - 466723657.3
muramidaseBHV66_00030Not Available+4808 - 580637556.0
Ncrna_class:rnase_p_rnaNot AvailableNot Available+5352 - 5706Not Available
hypothetical proteinBHV66_00035Not Available+5825 - 651126791.8
dipeptidyl aminopeptidaseBHV66_00040Not Available+6554 - 868380638.5
cysteine methyltransferaseBHV66_00045Not Available+8697 - 916717237.0

Displaying genes 1 – 10 of 2085 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

83 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 83 metabolites