Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsenosidimutans |
| Strain | strain KACC 14530 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2001689 bp
Thymine Count
1994959 bp
Guanine Count
1241729 bp
Cytosine Count
1279176 bp
Genome Length
6517553 bp
Protein-coding Genes
5263 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 10 - 121 | Not Available |
| hypothetical protein | ASU31_00005 | Not Available | - | 120 - 2474 | 86334.6 |
| hypothetical protein | ASU31_00010 | Not Available | - | 2553 - 2750 | 7166.14 |
| trna threonylcarbamoyl adenosine modification protein tsad | ASU31_00015 | Not Available | - | 3000 - 4001 | 36055.5 |
| hypothetical protein | ASU31_00020 | Not Available | + | 4076 - 8506 | 165252.0 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | ASU31_00025 | Not Available | - | 9442 - 10653 | 44127.2 |
| permease | ASU31_00030 | Not Available | - | 10793 - 12217 | 53547.4 |
| hypothetical protein | ASU31_00035 | Not Available | - | 12248 - 12628 | 14919.5 |
| Trna-met | Not Available | Not Available | + | 13702 - 13778 | Not Available |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 16710 - 17089 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
