Pedobacter ginsenosidimutans strain KACC 14530

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter ginsenosidimutans strain KACC 14530 is a Gram-negative, rod-shaped bacterium that thrives in aerobic conditions and has an optimal growth temperature of 29.0°C. As a non-spore-forming organism, this strain exhibits consistent cellular morphology and growth characteristics under controlled laboratory conditions. The Gram-negative nature of P. ginsenosidimutans suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane, which is typical of this bacterial group. This structural feature may influence its interactions within various environments, particularly in terms of resistance to certain antibiotics and environmental stressors. The aerobic requirement indicates that strain KACC 14530 relies on oxygen for its metabolic processes, positioning it within ecosystems where oxygen is readily available. Given its specific growth temperature, P. ginsenosidimutans may be well adapted to moderate climates or specific niches such as soil or decaying organic matter, where it could play a role in biogeochemical cycles. Its unique profile may suggest potential applications in biotechnology, particularly in the field of bioremediation or organic matter decomposition, where aerobic bacteria are often instrumental. Further investigation into the metabolic pathways and ecological roles of this strain could provide insights into its interactions with other microorganisms and its contributions to nutrient cycling in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter ginsenosidimutans
Strainstrain KACC 14530

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter ginsenosidimutans strain KACC 14530


Gene Summary

Adenine Count

2001689 bp

Thymine Count

1994959 bp

Guanine Count

1241729 bp

Cytosine Count

1279176 bp

Genome Length

6517553 bp

Protein-coding Genes

5263 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+10 - 121Not Available
hypothetical proteinASU31_00005Not Available-120 - 247486334.6
hypothetical proteinASU31_00010Not Available-2553 - 27507166.14
trna threonylcarbamoyl adenosine modification protein tsadASU31_00015Not Available-3000 - 400136055.5
hypothetical proteinASU31_00020Not Available+4076 - 8506165252.0
3,4-dihydroxy-2-butanone 4-phosphate synthaseASU31_00025Not Available-9442 - 1065344127.2
permeaseASU31_00030Not Available-10793 - 1221753547.4
hypothetical proteinASU31_00035Not Available-12248 - 1262814919.5
Trna-metNot AvailableNot Available+13702 - 13778Not Available
Ncrna_class:rnase_p_rnaNot AvailableNot Available+16710 - 17089Not Available

Displaying genes 1 – 10 of 5322 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites