Sphingomonas sp. Leaf29

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. Leaf29
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingomonas sp. Leaf29
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. Leaf29

LMKY00000000.1

Gene Summary

Adenine Count

651515 bp

Thymine Count

654501 bp

Guanine Count

1319920 bp

Cytosine Count

1319540 bp

Genome Length

3945508 bp

Protein-coding Genes

3489 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
TerminaseASE81_05650Not Available+1888008 - 188931546572.8
Portal proteinASE81_05655Q4UM95+1889791 - 189091239635.4
hypothetical proteinASE81_05660Not Available+1891220 - 189152810835.1
Putative prohead proteaseASE81_05665Not Available+1891516 - 189189312942.7
Putative major capsid proteinASE81_05670Not Available+1892146 - 189311733704.9
hypothetical proteinASE81_05675Not Available+1893227 - 189372117170.1
hypothetical proteinASE81_05680Not Available+1893718 - 18939216994.4
hypothetical proteinASE81_05685Not Available+1893918 - 189429813268.3
Gene transfer aget (gta) orfg9-like phage major tail proteinASE81_05690Not Available+1894587 - 189499413870.3
hypothetical proteinASE81_05695Not Available+1894991 - 189530210594.0

Displaying genes 1 – 10 of 3553 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

245 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da

Displaying 1–10 of 245 metabolites