Vibrio alginolyticus strain UCD-9C

Motilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio alginolyticus strain UCD-9C is a Gram-negative, facultative anaerobic bacterium that thrives in marine environments, exhibiting optimal growth at a temperature of 30.0 °C. This strain belongs to the Vibrio genus, which is characterized by its rod-shaped morphology and motility, typically attributed to a single polar flagellum. As a member of the marine microbiota, V. alginolyticus strain UCD-9C is adapted to fluctuating environmental conditions, including varying levels of salinity and nutrient availability. Its facultative anaerobic nature allows it to utilize oxygen when available, while also being capable of fermentative metabolism in its absence. This metabolic flexibility is likely advantageous for survival in diverse marine habitats, where oxygen levels can vary significantly. The ecological role of V. alginolyticus strain UCD-9C may involve participation in nutrient cycling and decomposition processes within its marine ecosystem. The ability to thrive at a relatively moderate temperature suggests a potential adaptability to seasonal temperature fluctuations in coastal waters. Furthermore, the presence of this strain in marine environments highlights the importance of studying microbial diversity in these habitats, as such organisms can influence both local ecology and broader biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio alginolyticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature30
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio alginolyticus strain UCD-9C


Gene Summary

Adenine Count

1640871 bp

Thymine Count

1628964 bp

Guanine Count

1305388 bp

Cytosine Count

1286854 bp

Genome Length

5862215 bp

Protein-coding Genes

5176 genes

Non-Coding Genes

189 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
DaraAOG25_17345O21970-3751196 - 3755989178814.0
HdfAOG25_17350Not Available-3755986 - 375661223550.8
Lysis determining protein lydbAOG25_17355Not Available-3756605 - 375701515635.0
hypothetical proteinAOG25_17360Not Available-3757015 - 375733811174.6
hypothetical proteinAOG25_17365Not Available-3757465 - 37577199853.05
Long tail fiber distal subunitAOG25_17370Not Available-3757740 - 376036793968.3
Putative tail fiber proteinAOG25_17375Not Available-3760462 - 376158038489.4
Tail fiber repeat family proteinAOG25_17380Not Available-3761652 - 376291146048.1
hypothetical proteinAOG25_17385Not Available-3762911 - 376337216850.0
Putative baseplate structural proteinAOG25_17395Not Available-3764390 - 376578752660.4

Displaying genes 1 – 10 of 5365 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

242 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 242 metabolites