Xanthomonas oryzae strain X11-5A

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas oryzae strain X11-5A is a Gram-negative, rod-shaped bacterium that exhibits aerobic growth, indicating its requirement for oxygen in metabolic processes. This strain is host-associated, suggesting a specialized relationship with its host organism, which may provide essential nutrients or a conducive environment for its survival and proliferation. The Gram-negative cell wall structure of X. oryzae, characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, may contribute to its adaptability in host-associated habitats. The rod shape of the bacterium is typical for many species within the Xanthomonadaceae family, which often exhibit motility that facilitates colonization of host tissues. Xanthomonas oryzae strains are known for their association with agricultural plants, and while this description does not specify pathogenicity, it highlights the potential for interactions with plant hosts that could influence agricultural practices. Understanding the ecological role of X11-5A within its host environment may offer insights into its contributions to nutrient cycling or its effects on host health and development. This knowledge could prove valuable in the context of crop management and disease prevention strategies in agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas oryzae
Strainstrain X11-5A

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Xanthomonas oryzae strain X11-5A
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas oryzae strain X11-5A


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative methylaseADT25_10965Not Available-2325241 - 232603530562.0
Ribonuclease iiiADT25_10970Not Available-2326152 - 232688324625.7
Tail proteinADT25_10975Not Available-2326885 - 2330748140376.0
hypothetical proteinADT25_10980Not Available+2330829 - 233119412861.5
Hypothetical proteinADT25_10985Not Available-2331173 - 233204831582.7
Glycoside hydrolase family proteinADT25_10990Not Available-2332045 - 233264722622.4
Putative tail length tape measure proteinADT25_10995O64330-2332650 - 2336195124897.0
hypothetical proteinADT25_11000Not Available-2336267 - 23364857907.41
Hypothetical proteinADT25_11005Not Available-2336587 - 233693712926.4
phage tail proteinADT25_11010Not Available-2336941 - 233739315445.2

Displaying genes 1 – 10 of 4268 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites