Rickettsia hoogstraalii str. RCCE3

ovoid

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsia hoogstraalii str. RCCE3 is a Gram-negative, ovoid-shaped bacterium classified within the Rickettsiaceae family. This microbe exhibits characteristics typical of the Rickettsia genus, notably its obligate intracellular lifestyle, which necessitates a host cell for growth and reproduction. The Gram-negative nature of Rickettsia hoogstraalii str. RCCE3 suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane, which may contribute to its unique physiological properties and interactions with host organisms. As an ovoid-shaped bacterium, Rickettsia hoogstraalii str. RCCE3's morphology could influence its movement and penetration into host cells, an essential aspect for a pathogen that relies on intracellular survival. While specific ecological roles and pathogenicity have not been detailed, the structural traits of Rickettsia hoogstraalii str. RCCE3 hint at potential interactions within its environment, possibly involving symbiotic or parasitic relationships with various hosts. Further research into the ecological dynamics of Rickettsia hoogstraalii str. RCCE3 may reveal its interactions within microbial communities or its evolutionary adaptations to host environments, providing insights into the broader implications of Rickettsia species in microbial ecology and host-pathogen interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia hoogstraalii
StrainRCCE3

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rickettsia hoogstraalii str. RCCE3


Gene Summary

Adenine Count

773750 bp

Thymine Count

783180 bp

Guanine Count

365708 bp

Cytosine Count

380455 bp

Genome Length

2303093 bp

Protein-coding Genes

2469 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Terminase small subunitRHORCCE3_0431Not Available+406119 - 40667021138.5
Terminase large subunitRHORCCE3_0432P36693+406627 - 40744230501.0
Large terminase subunitRHORCCE3_0433P03708+407512 - 40780211222.6
Putative phage-related proteinRHORCCE3_0434Not Available+407912 - 40846621217.0
Lambda-like phage portal proteinRHORCCE3_0435B0ZSF2+408471 - 40989854294.7
Major capsid proteinRHORCCE3_0436B0ZSF3+409915 - 41182870702.3
Putative dna-binding helix-turn-helix proteinRHORCCE3_0437Q46560-411829 - 41214011989.6
ToxinRHORCCE3_0438Not Available-412153 - 41243110641.5
hypothetical proteinRHORCCE3_0439Not Available+412492 - 41280011390.5
hypothetical proteinRHORCCE3_0440Not Available+412804 - 41324416373.7

Displaying genes 1 – 10 of 2517 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

41 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da

Displaying 1–10 of 41 metabolites