Neisseria flavescens strain CNF seq0063

Gram-negativeAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Neisseria

Description

Neisseria flavescens strain CNF seq0063 is a Gram-negative bacterium identified within the duodenum, indicating its adaptation to a specific niche in the gastrointestinal tract. This strain is classified as an aerobic organism, requiring oxygen for its metabolic processes, which suggests a potential role in the microbial community dynamics of the upper intestine where oxygen levels may vary. The presence of N. flavescens in the duodenum may imply its involvement in the complex interactions between gut microbiota and host physiology, particularly in nutrient absorption and immune modulation. While the specific interactions and functional contributions of this strain remain to be fully elucidated, its aerobic nature highlights the potential for competition with other microbial species that may thrive in oxygen-rich environments. Overall, N. flavescens strain CNF seq0063 exemplifies the diverse microbial inhabitants of the human gastrointestinal tract, contributing to the overall function and balance of gut microbiota. This underscores the importance of studying such strains to better understand their roles in health and disease, particularly in the context of microbial ecology within the duodenum.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusNeisseria
SpeciesNeisseria flavescens
Strainstrain CNF seq0063

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Neisseria flavescens strain CNF seq0063
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatduodenum
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neisseria flavescens strain CNF seq0063


Gene Summary

Adenine Count

584287 bp

Thymine Count

599550 bp

Guanine Count

578396 bp

Cytosine Count

554388 bp

Genome Length

2316621 bp

Protein-coding Genes

1996 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+264 - 1792Not Available
hypothetical proteinTW91_0283Not Available-111 - 76724331.3
abc transporter, atp-binding proteinTW91_0284Not Available-764 - 167833744.6
23s ribosomal rnaNot AvailableNot Available+2411 - 5297Not Available
hypothetical proteinTW91_0285Not Available-1706 - 244927764.9
hypothetical proteinTW91_0286Not Available-2530 - 352837303.5
ferredoxin, 4fe-4s bacterial typeTW91_0287Not Available-3599 - 445030804.0
sec-c motif domain proteinTW91_0288Not Available+4713 - 507813909.7
5s ribosomal rnaNot AvailableNot Available+5393 - 5505Not Available
inositol monophosphatase family proteinTW91_0289Not Available-5344 - 613229198.8

Displaying genes 1 – 10 of 2049 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites