Neisseria flavescens strain CD-NF3 seq0022

Gram-negativeAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Neisseria

Description

Neisseria flavescens strain CD-NF3 seq0022 is a Gram-negative bacterium identified within the duodenal habitat, suggesting its potential role in the gastrointestinal microbiota. As an aerobic organism, this strain requires oxygen for growth and metabolism, positioning it within environments where oxygen is readily available, such as the upper gastrointestinal tract. The presence of N. flavescens in the duodenum indicates its adaptation to the specific conditions of this region, which is characterized by a relatively high oxygen tension compared to other sections of the gastrointestinal tract. This strain may play a role in the complex microbial ecosystem of the duodenum, contributing to the digestion and absorption processes that occur in this part of the intestine. Given its Gram-negative status, N. flavescens strain CD-NF3 seq0022 possesses an outer membrane that may confer certain protective properties, influencing its interactions with other microbial species and the host environment. While the precise ecological functions of this strain remain to be elucidated, its adaptation to an aerobic niche within the duodenum may suggest involvement in processes such as nutrient metabolism or modulation of host immune responses. Further research is warranted to clarify its ecological significance and potential interactions within the duodenal microbiome.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusNeisseria
SpeciesNeisseria flavescens
Strainstrain CD-NF3 seq0022

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Neisseria flavescens strain CD-NF3 seq0022
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatduodenum
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neisseria flavescens strain CD-NF3 seq0022


Gene Summary

Adenine Count

601137 bp

Thymine Count

592640 bp

Guanine Count

558663 bp

Cytosine Count

580577 bp

Genome Length

2333017 bp

Protein-coding Genes

1969 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
polyphosphate kinaseTW90_0001Not Available+39 - 104938240.5
5s ribosomal rnaNot AvailableNot Available+870 - 982Not Available
23s ribosomal rnaNot AvailableNot Available+1081 - 3967Not Available
transposase, is4 familyTW90_0085Not Available+1867 - 21038959.03
histidine--trna ligaseTW90_0914Not Available+2284 - 318932679.2
adenylosuccinate synthaseTW90_0915Not Available+3233 - 453146321.8
16s ribosomal rnaNot AvailableNot Available+4586 - 6114Not Available
formate acetyltransferaseTW90_0916Not Available+4834 - 711985511.5
pyruvate formate-lyase 1-activating enzymeTW90_0917Not Available+7151 - 806534855.0
proline--trna ligaseTW90_0918Not Available-8132 - 984463190.5

Displaying genes 1 – 10 of 2024 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites